Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX253336: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Sage-129305' containing sample HG03746
8 ILLUMINA (Illumina HiSeq 2000) runs: 32M spots, 6.5G bases, 3.1Gb downloads

UUID: bee564a9-fec1-4677-a8c8-9b65b6555a75

Design: Illumina sequencing of Homo sapiens via random selection

Submitted by: Broad Institute (BI)

Study: Whole genome sequencing of (STU) Sri Lankan Tamil in the UK HapMap population. DNA for sequencing was extracted from whole blood

PRJNA177415 • SRP016100 • All experiments • All runs

Sample: Coriell HG03746

SAMN01090987 • SRS350877 • All experiments • All runs

Organism: Homo sapiens

Library:

Name: Sage-129305

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 7 attributes...) (hide...)

gssr_id: 268500.0

lsid: broadinstitute.org:bsp.prod.sample:3POKI

material_type: DNA:DNA Genomic

project: G27070

root_sample_id: SM-3H123

sample_id: SM-3POKI

work_request: 33754

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2012-12-26 12:25:47.0	GAPipeline	RTA1.15.19.5	Sequencer Application 1.6.8.6

Runs: 8 runs, 32M spots, 6.5G bases, 3.1Gb

Run	# of Spots	# of Bases	Size	Published
SRR789908	4,075,370	823.2M	402.7Mb	2013-03-21
SRR790787	4,064,896	821.1M	404.5Mb	2013-03-22
SRR790928	4,029,179	813.9M	400.5Mb	2013-03-22
SRR793631	4,036,786	815.4M	400.3Mb	2013-03-23
SRR794944	3,989,000	805.8M	393.7Mb	2013-03-24
SRR795369	4,006,081	809.2M	393.9Mb	2013-03-24
SRR795865	3,773,844	762.3M	368.9Mb	2013-03-24
SRR796232	3,991,432	806.3M	394.3Mb	2013-03-24

ID:: 354232

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